The IMC is on the CPU as you know, and it sounds as if your first CPU has a very good IMC. The board should not make too much difference at all with regard to memory being picked up.
But let us test each slot using Memtest86+ and see if the board is defective. Basically test each slot and then see which combination of slots do not get picked up when populated.
To help us help you - please provide as much information about your system and the problem as possible.